Outlier Detection in QSAR Modeling of the Biological Activity of Chemicals by Analyzing the Structure–Activity–Similarity Maps
- Autores: Grigoreva L.D.1, Grigorev V.Y.2, Yarkov A.V.2
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Afiliações:
- Department of Fundamental Physical and Chemical Engineering
- Institute of Physiologically Active Compounds
- Edição: Volume 74, Nº 1 (2019)
- Páginas: 1-9
- Seção: Article
- URL: https://journal-vniispk.ru/0027-1314/article/view/163828
- DOI: https://doi.org/10.3103/S0027131419010036
- ID: 163828
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Resumo
A new method for the detection of outliers in training sets used in QSAR model construction is developed. The method is based on the analysis of structure–activity–similarity (SAS) maps. It involves an empirical assessment of the likelihood of a chemical compound appearing in a particular SAS area. We propose to regard the compounds that have the maximal probability of an “activity cliff” (AC) region and the minimal probability of appearing in a “smooth region” (SR) as outliers. The method proposed can be used in the field of medicinal chemistry to search for new promising biologically active chemical compounds.
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Sobre autores
L. Grigoreva
Department of Fundamental Physical and Chemical Engineering
Autor responsável pela correspondência
Email: ldg@physchem.msu.ru
Rússia, Moscow
V. Grigorev
Institute of Physiologically Active Compounds
Email: ldg@physchem.msu.ru
Rússia, Chernogolovka, Moscow oblast
A. Yarkov
Institute of Physiologically Active Compounds
Email: ldg@physchem.msu.ru
Rússia, Chernogolovka, Moscow oblast
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