Discovery of Selective Inhibitors of Imidazoleglycerol-Phosphate Dehydratase from Mycobacterium tuberculosis by Virtual Screening


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Abstract

Bacterial imidazoleglycerol-phosphate dehydratase from Mycobacterium tuberculosis (HisB-Mt) is a convenient target for the discovery of selective inhibitors as potential antituberculosis drugs. The virtual screening was performed to find compounds suitable for the design of selective inhibitors of HisB-Mt. The positions of four ligands, which were selected based on the docking scoring function and docked to the activesite region of the enzyme, were refined by molecular dynamics simulation. The nearest environment of the ligands was determined. These compounds selectively bind to functionally essential active-site residues, thus blocking access of substrates to the active site of the enzyme, and can be used as lead compounds for the design of selective inhibitors of HisB-M.

About the authors

D. Podshivalov

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,”; National Research Centre “Kurchatov Institute,”; Moscow State University

Author for correspondence.
Email: david.podshivalov@mail.ru
Russian Federation, Moscow, 119333; Moscow, 123098; Moscow, 119991

Yu. B. Mandzhieva

Moscow State University

Email: david.podshivalov@mail.ru
Russian Federation, Moscow, 119991

D. D. Sidorov-Biryukov

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,”

Email: david.podshivalov@mail.ru
Russian Federation, Moscow, 119333

V. I. Timofeev

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,”; National Research Centre “Kurchatov Institute,”

Email: david.podshivalov@mail.ru
Russian Federation, Moscow, 119333; Moscow, 123098

I. P. Kuranova

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,”; National Research Centre “Kurchatov Institute,”

Email: david.podshivalov@mail.ru
Russian Federation, Moscow, 119333; Moscow, 123098

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