


Vol 65, No 2 (2018)
- Year: 2018
- Articles: 17
- URL: https://journal-vniispk.ru/1021-4437/issue/view/11197
Research Papers
GmDim1 Gene Encodes Nucleolar Localized U5-Small Nuclear Ribonucleoprotein in Glycine max
Abstract
The dim1+ gene family is essential for G2/M transition during mitosis and encodes a small nuclear ribonucleoprotein that functions in the mRNA splicing machinery of eukaryotes. However, the plant homolog of DIM1 gene has not been defined yet. Here, we identified a gene named GmDim1 positioned on chromosome 9 of soybean (Glycine max (L.) Merr.) with 80% homology to other eukaryotic dim1+ family genes. A domain of soybean DIM1 protein was primarily conserved with U5 snRNP protein family and secondarily aligned with mitotic DIM1 protein family. The GmDim1 gene was expressed constitutively in all soybean organs. The transgenic Arabidopsis thaliana (L.) plants overexpressing GmDim1 showed early flowering and stem elongation, produced multiple shoots and continued flowering after the post-flowering stage. DIM1 proteins transiently expressed in onion cells were localized in the nucleus with dense deposition in the nucleolus. Therefore, we propose that the soybean GmDim1 gene is a component of plant U5 snRNP involved in mRNA splicing and normal progress of plant growth.



Comparative Transcriptome Analysis of Pecan Female and Male Inflorescences
Abstract
Pecan (Carya illinoinensis (Wangenh.) K.Koch) is a popular long-lived diploid tree insilviculture and horticulture. Pecan is a wind pollinated monoecious tree exhibiting heterodichogamy, and the location and timing of functioning female and male organs are different. The limited availability of pecan genomic information has hindered research on the mechanisms underlying its flower development. In this study, we obtained the first de novo assembly of pecan transcriptome and performed acomparative analysis of pecan female and male inflorescences using RNA-seq technology. A final dataset containing 53894 unigenes in the female pecan inflorescence was obtained, with an N50 length of 1411 bp, while only small differences existed among female and male inflorescence unigenes. Using the bioinformatics approach, we identified 11813 simple sequence repeats in unigenes and developed primers for 7725 of them. A total of 5826 differentially expressed genes were identified between pecan female and male inflorescences. A large number of them were linked to plant hormone regulation, especially revolved in the gibberellin biosynthesis (GA2OX and GA20OX), gibberellin signal reception (GID1) and gibberellin regulation (GASA, GRF, GRAS). In addition, almost onetenth (569) of unigenes encoding transcription factors in pecan differentially expressed. At least 15 ARF, 3 bZIP, 33 bHLH, 8 GH3, 13 MADS-box, 92 MYB, 28 NAC and 14 zf-Dof transcription factors were associated with pecan flower sex differentiation. This assembly of pecan transcriptome could contribute to enhancing understanding of the gene specialization in flowers of different sexes, and also be particularly useful for pecan germplasm management and breeding programs.



Growth of Transgenic Tobacco Plants with Changed Expression of Genes Encoding Expansins under the Action of Stress Factors
Abstract
The peculiarities of root growth and stress tolerance of transgenic tobacco plants with constitutive expression of NtEXPA1 and NtEXPA5 genes, as well as plants with reduced expression of NtEXPA4 gene encoding α-expansins of Nicotiana tabacum, were studied during prolonged cultivation under conditions of drought, salinity, and low positive temperatures. Increased expression of expansin genes led to an increase in the growth rate and root length both under normal plant growth conditions and at 12°C and 50 mM NaCl. Increased expression of expansin genes influenced the changes in the fresh and dry mass of a shoot, leading to an increase in their exposure to hypothermia. Transgenic plants with a reduced level of NtEXPA4 expansin gene expression were characterized by a reduction in the fresh and dry weight of a shoot due to drought and low positive temperatures. The totality of the data obtained may indicate the involvement of NtEXPA1, NtEXPA4, and NtEXPA5 tobacco expansin genes in the regulation of growth under hypothermia, drought, and salinity.



Phosphate Limitation Alters Medicago–Sinorhizobium Signaling: Flavonoid Synthesis and AHL Production
Abstract
The legume plant Medicago truncatula Gaertn. can establish a symbiotic interaction with Sinorhizobium meliloti. One of the most limiting factors for symbiosis is phosphate (P) deficiency. Therefore, legumes and their symbiotic partners, rhizobia, have developed mechanisms to adapt to P restriction. In the non-symbiotic state, plants would up-regulate flavonoid biosynthesis via increasing the expression of chalcone synthase (chs), catalyzing the first step of flavonoid synthesis. Simultaneously, bacterial quorum sensing (QS) pathway can regulate the expression of certain genes involved in symbiotic functions of bacteria in response to P availability as well as bacterial population. Since both flavonoids and QS signaling molecules (N-acyl homoserine lactones, AHL) play important roles in the rhizobia-legume symbiosis, we evaluated these processes in the symbiotic state under different P concentrations and bacterial populations. In this study, by using real-time PCR and HPLC, we showed the expression of pt1 (phosphate transporter 1) and chs as well as luteolin production increased, in a time dependent manner, in plants following P limitation. Nod gene inducing flavonoids can up-regulate the bacterial QS pathway which results in an increase in AHL production, possibly to enhance symbiotic behaviors of rhizobia. It has been estimated that there is a feedback loop from bacterial AHL to flavonoid production pathway in legume plants.



MiR395 Overexpression Increases Eggplant Sensibility to Verticillium dahliae Infection
Abstract
Verticillium wilt (V. wilt), a notorious wilt disease caused by Verticillium dahliae, often leads to the reduction of eggplant (Solanum melongena L.) production. MiRNAs, as a class of small RNAs, can regulate gene expression and then affect growth and development in plants. MiR395 has been proven to respond to sulfate-deficient stress in Arabidopsis thaliana and sulfate is well known to have a close relationship with plant disease resistance. To explore the function of eggplant miR395, we examined its expression in V. dahliae-infected eggplant by qRT-PCR and found miR395 exhibited a gradual reduction trend with time after infection. We then expressed pre-miR395 from Arabidopsis thaliana in Suqi eggplant and resistance analysis showed that miR395 overexpressed plants were hypersensitive to V. dahliae infection. We further measured the content of GSH and activities of POD and SOD and the results indicated that the index of GSH/POD/SOD in the overexpressed plants was lower than that of the wild-type control under V. dahliae infection. These results suggest that miR395 plays a negative role in eggplant response to V. dahliae infection.



Glutathione in Intact Vacuoles: Comparison of Glutathione Pools in Isolated Vacuoles, Plastids, and Mitochondria from Roots of Red Beet
Abstract
Proportions between oxidized and reduced glutathione forms were determined in vacuoles isolated from red beet (Beta vulgaris L.) taproots. The pool of vacuolar glutathione was compared with glutathione pools in isolated plastids and mitochondria. The ratio of glutathione forms was assessed by approved methods, such as fluorescence microscopy with the fluorescent probe monochlorobimane (MCB), high-performance liquid chromatography (HPLC), and spectrophotometry with 5,5′-dithiobis-2-nitrobenzoic acid (DTNB). The fluorescence microscopy revealed comparatively low concentrations of reduced glutathione (GSH) in vacuoles. The GSH content was 104 μM on average, which was lower than the GSH levels in mitochondria (448 μM) and plastids (379 μM). The content of reduced (GSH) and oxidized (GSSG) glutathione forms was quantified by means of HPLC and spectrophotometric assays with DTNB. The glutathione concentrations determined by HPLC in the vacuoles were 182 nmol GSH and 25 nmol GSSG per milligram protein. The respective concentrations of GSH and GSSG in the plastids were 112 and 6 nmol/mg protein and they were 228 and 10 nmol/mg protein in the mitochondria. The levels of GSH determined with DTNB were 1.5 times lower, whereas the amounts of GSSG were, by contrast, 1.5–2 times higher than in the HPLC assays. Although the glutathione redox ratios depended to some extent on the method used, the GSH/GSSG ratios were always lower for vacuoles than for plastids and mitochondria. In vacuoles, the pool of oxidized glutathione was higher than in other organelles.



Participation of Nitric Oxide in 24-Epibrassinolide-Induced Heat Resistance of Wheat Coleoptiles: Functional Interactions of Nitric Oxide with Reactive Oxygen Species and Ca Ions
Abstract
Nitric oxide (NO) effects on heat resistance of wheat (Triticum aestivum L.) coleoptiles induced by 24-epibrassinolide (24-EB) have been investigated. Coleoptiles’ survival after damaging heating (43°С, 10 min) increased when they were treated preliminarily with 5–200 nM of 24-EB. After 24-EB treatment, transient amplification of nitric oxide (NO) and also ROS (superoxide anion-radical (O2•−) and hydrogen peroxide) generation by coleoptiles was noted. Coleoptiles pretreatment with inhibitors of nitrate reductase and an enzyme similar to animal NO-synthase partially removed the increase of NO content caused by the action of 24-EB. Amplification of superoxide anion-radical generation caused by 24-EB was depressed under the influence of imidazole (NADPH-oxidase inhibitor). Calcium antagonists (EGTA and neomycin) largely neutralized the 24-EB-induced increase in generation of both O2•− and NO. The increase in NO content in coleoptile tissues caused by 24-EB was almost completely leveled by antioxidants and partly by imidazole. 24-EB-induced enhancement of the superoxide anion-radical generation was partially suppressed by the action of NO scavenger PTIO (2-phenyl-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide) and the inhibitors of nitrate reductase and an enzyme similar to animal NO-synthase. Positive 24-EB effect on the heat resistance of wheat coleoptiles was leveled by PTIO, inhibitors of enzymes that generate NO, antioxidants, an inhibitor of NADPH-oxidase imidazole, and calcium antagonists. A conclusion was made on the role of NO in brassinosteroid signal transduction inducing heat resistance development of coleoptiles and on the functional interaction between NO, ROS, and calcium ions as the signal mediators.



Spermine Pre-Treatment Improves Some Physiochemical Parameters and Sodium Transporter Gene Expression of Pumpkin Seedlings under Salt Stress
Abstract
It is known that polyamines (PAs) including spermine (Spm) enhance the abiotic stress tolerance of crops. Here, the effects of hydroponic Spm pre-treatment on the amelioration of the adverse effects of salinity were investigated in pumpkin (Cucurbita pepo L.) that is an economically important horticultural crop and sensitive to salinity, especially at the establishment stage. For this purpose, 10-day-old, uniform-sized seedlings were transplanted to plastic containers containing Hoagland nutrient solution. Spm was added at 0.1 and 1 mM to the hydroponic medium for 5 days before stress. The plants were treated with 40 and 80 mM NaCl for inducing salinity stress. Salt stress reduced the plant growth and potassium content in roots, and these detrimental effects were alleviated when plants were pre-treated with Spm. Salinity stress caused a significant increase in sodium and γ-amino butyric acid (GABA) content when compared with controls. Spm pre-treatment ameliorated these salinity stress effects by increasing sodium content of root and leaves GABA content. Expression analysis of two sodium transporter genes, salt overly sensitive1 (SOS1) and Na+/H+ exchanger (NHX1) revealed that their expression was differentially induced in roots of plants treated either with salinity or Spm. These results suggest that Spm via the overexpression of the NHX1 gene substantially increased the tolerance to stress by sequestering excess Na+ into the vacuoles and sustaining a better cellular environment. Moreover, Spm has potential to scavenge directly free radical and to alleviate growth inhibition and promote the activity of antioxidant system enzymes in pumpkin seedlings under salt stress.



Changes in Oil Accumulation and Fatty Acid Composition of Soybean Seeds under Salt Stress in Response to Salicylic Acid and Jasmonic Acid
Abstract
greenhouse experiment with factorial arrangement based on randomized complete block design with four replications was conducted in 2015 to evaluate the effects of salicylic acid (SA) (1 mM) and jasmonic acid (JA) (0.5 mM) on oil accumulation and fatty acid composition of soybean oil (Glycine max L.) under salt stress (Non-saline, 4, 7, and 10 dS/m NaCl). Oil percentage of soybean seeds declined, while oil content per seed enhanced with increasing seed filling duration. Foliar application of SA improved oil content per soybean seed at different stages of development under all salinity levels. Although JA treatment enhanced seed oil percentage, oil yield of these plants decreased as a result of reduction in seed yield per plant. In contrast, the highest oil yield was recorded for SA treated plants, due to higher seed yield. Salinity had no significant effects on percentage of palmitic acid and stearic acid, but treatment with JA significantly reduced stearic acid percentage. Oleic acid content of seeds increased, but percentages of linoleic acid, linolenic acid and unsaturation index (UI) of soybean oil decreased with increasing salinity. Foliar application of SA and JA improved oil quality of soybean seeds by reducing oleic acid and enhancing linoleic acid, linolenic acid contents and UI. Exogenous application of SA had the most beneficial effects on soybean seeds due to enhancing oil yield and quality under saline and non-saline conditions.



Effect of Fungicide (Maneb) on Antioxydant System and Carbon Assimilation in Leaves of Sorghum Plants
Abstract
The effects of Maneb on antioxidant potentials and carbon assimilation were studied in leaves sorghum (Sorghum bicolor L.) plants (C4 species). The plants were sprayed by three doses; recommended dose (2.5 g/L), twice and three times higher at 25, 40 and 55 days after planting (DAP). The leaves were harvested at 5, 10 and 15 days after treatment (DAT) and proteins content, activities of antioxidative enzymes catalase (CAT), guaiacol peroxidase (POD), glutathione reductase (GR), glutathione-S-transferases (GST) and glyoxalase I (GlyI) as well as activity of key enzyme in primary fixation of atmospheric CO2 phosphoenolpyruvate carboxylase (PEPC) and chlorophyll content were estimated. The protein content was found increased under Maneb treatment. While the POD and GR activities appear unaffected, CAT activity increased at 10 and 15 DAT. Whereas the GST activity increased significantly in plants treated with 5 g/L at 5 DAT and in plant exposed to 2.5 g/L at 10 DAT. The activity and proteins levels of GlyI were increased progressively with increasing fungicide treatment. This increase was more pronounced at 5 DAT; being 1.7 and 1.5 fold for 5 and 7.5 g/L, respectively. However, both PEPC activity and chlorophyll content seem unchanged in presence of fungicide even at high concentration. These results indicate that sorghum leaves have a well-developed systems of protection from carbonyl stress.



Effect of Drought Stress on Lipid Peroxidation, Osmotic Adjustment and Antioxidant Enzyme Activity of Leaves and Roots of Lycium ruthenicum Murr. Seedling
Abstract
Seedling stage is a critical period for survival and growth under drought stress. In the current study, we determined effects of drought stress on physiological and biochemical parameters of leaves and roots of Lycium ruthenicum Murr. seedling. The variables measured were lipid peroxidation (in terms of malondialdehyde (MDA) content), osmotic substances (free proline, soluble protein, and soluble sugar), and antioxidative enzymes (peroxidase (POD), superoxide dismutase (SOD), and catalase (CAT)). Free proline, soluble sugar, and MDA of leaves and roots increased with increasing stress level. Leaves displayed higher accumulations of free proline and MDA than roots. However, roots showed higher total soluble sugar than leaves. Under drought stress, soluble proteins in leaves and roots decreased initially and then increased. Meanwhile, measured proteins were higher in leaves. Under drought stress, SOD, POD, and CAT activities in leaves increased initially and then decreased but increased with increasing drought stress level in roots. Under drought the level of accumulation of osmotics was higher in the leaves than in the roots, while increased activity of antioxidant enzymes persisted in the stressed roots longer that in the leaves.



Multi-Wall Carbon Nanotubes Effects on Plant Seedlings Growth and Cadmium/Lead Uptake In Vitro
Abstract
The effects of multi-wall carbon nanotubes (MWCNTs) on plant growth and Cd/Pb accumulation was investigated on seedlings of three plant species including Brassica napus L., Helianthus annus L. and Cannabis sativa L. The experiment consisted of MWCNTs on three concentration levels (0, 10, 50 mg/L) and 200 μM CdCl2 or 500 μM Pb(NO3)2. MWCNTs application effectively improved root and shoot growth inhibited by Cd and Pb salts. In B. napus, total chlorophyll (Chl) content increased by both MWCNTs 10 and 50 mg/L exposure under cadmium or lead stress. MWCNT 10 mg/L mitigated the deleterious effects of Cd ions on total chlorophyll content of H. annus and C. sativa. Wherease higher concentration of MWCNTs decreased Chl content under either Cd or Pb treatments on sunflower seedlings. MWCNT10 effectivly raised cadmium accumulation in seedlings of all three species. MWCNT10 and 50 mg/L also caused higher Pb accumulation in canola and cannabis seedlings, respectively. Based on the results, it seems that the effects of MWCNTs on growth parameters and heavy metal accumulation in plant seedlings is strongly depends on heavy metal type, MWCNTs concentration and plant species.



Cadmium and Nickel Toxicity for Sinapis alba Plants Inoculated with Endophytic Strains of Bacillus subtilis
Abstract
We studied the effect of cadmium and nickel on Sinapis alba L. plants inoculated with endophytic strains of Bacillus subtilis. It was shown that treatment of S. alba seeds with endophytic strains of bacteria B. subtilis improves plant resistance to the toxic effect of cadmium and nickel and reduces manifestation of oxidative stress in the presence of higher levels of metal ions in the above-ground part of plants. Anti-stress effect and the ability of endophytic strains of B. subtilis to intensify uptake of cadmium and nickel ions by S. alba plants may be used for phytoextraction of heavy metals and stimulation of plant growth in contaminated areas.



Bioinformatics Analysis of Microarray Data to Reveal Novel Genes Related to Cold-Resistance of Maize
Abstract
Low temperature has become a major abiotic stress factor that can reduce maize yield and cause a number of economic loss. This study was designed to identify key genes and pathways associated with coldresistance of maize. The gene expression profile GSE46704, including 4 control temperature treated plants and 4 low temperature treated plants, was downloaded from the Gene Expression Omnibus database. Differentially-expressed genes (DEGs) were identified by limma package. Then, protein-protein interaction (PPI) network and module selection were constructed using Cytoscape. Moreover, the DEGs were re-matched based on the Zea mays L. gene ID and symbol data from PlantRegMap. Finally, the re-matched DEGs were performed functional and pathway enrichment analyses by the DAVID online tool. A total of 750 DEGs were screened (including 387 up-regulated and 363 down-regulated genes) In the PPI network, GRMZM2G070837_P01 and GRMZM2G114578_P01 had higher degrees. Besides, carbohydrate metabolic process, starch and sucrose metabolism and biosynthesis of secondary metabolites were significantly enriched in functional and pathway enrichment analysis. GRMZM2G070837_P01 and GRMZM2G114578_P01 might play a critical role in cold-resistance of maize. Meanwhile, carbohydrate metabolic process, starch and sucrose metabolism and biosynthesis of secondary metabolites might function in cold-resistance of maize.



Response of Сucumber (Cucumis sativus L.) Plants to Prolonged Permanent and Short-Term Daily Exposures to Chilling Temperature
Abstract
We investigated the response of chilling-sensitive plants of cucumber (Cucumis sativus L.) to prolonged permanent (6 days) (PLT) and short-term (3 h) daily exposures to low non-freezing temperatures (9 and 12°С) (DROP) lying on different sides of the critical value (10°С) corresponding to a phase transition of membrane lipids in chilling-sensitive plants from a liquid-crystalline to a solid gel structure. Effects and aftereffects of DROP treatments at temperatures of 9 and 12°С (DROP9 and DROP12, respectively) were identical. They caused a reduction in linear dimensions of plants (as compared with control plants) and enhanced chilling tolerance of leaves but did not influence photosynthetic activity and water relations. However, when exposure to these temperatures was permanent (PLT9 and PLT12), their effects on plants were different. PLT9 almost entirely suppressed plant growth and development, inactivated photosynthetic apparatus (PSA), increased relative electrolite leakage (REL), and boosted lipid peroxidation (LPO). PLT12 also considerably reduced plant height and leaf area and suppressed (but did not inactivate) PSA; it did not boost POL or increased REL. It is important that, after the termination of chilling, PLT9 plants (unlike PLT12 plants) could not quickly resume growth and restore photosynthetic activity. Thus, considerable differences in plant responses to various patterns of chilling (long permanent or short-term daily) are probably due to the fact that, in the case of DROP treatments, relatively short-term (3 h) chilling of plants is followed in the diurnal cycle by a prolonged period (21 h) of optimal temperature when possible deviations and/or disturbances of PSA are restored and toxic substances that could accumulate in the course of chilling metabolized and/or neutralized. Pronounced differences in plant response to permanent exposure to temperatures of 9 and 12°С probably depend on the fact that these temperatures lie on different sides of a critical value (10°С) below which chilling-sensitive plants suffer grave physiological disturbances due to cooling. In addition, we showed that different responses of plants to PLT and DROP treatments are not determined by a usual dose-effect relationship but depend in many respects on the pattern of temperature influence (prolonged or short-term, single or recurring). As a result, the number of DROP spans experienced by plants in the experiments proved to be more important than their duration (at least, within a time interval from 2 to 12 h).



Dehydrins in Buds of Main Birch Species under Conditions of Karelia
Abstract
The composition and seasonal dynamics of stress proteins-dehydrins in the buds of the main birch species (downy birch (Betula pubescens Ehrh.), silver birch (B. pendula Roth)) and its varieties (Karelian birch (B. pendula var. carelica (Mercklin) Hämet-Ahti)), growing in northwest Russia (on the example of the Republic of Karelia) were investigated for the first time. It was shown that the level of low-molecular dehydrins, mainly with a molecular mass of 17 kD, is subjected to major seasonal changes, regardless of the specific features of the birch. The maximal level of 17 kD dehydrin was formed during the autumn preparation of plants to dormancy and was persistently preserved during the cold period of the year. The content of medium-molecular weight dehydrins of 66–69 kD was almost at the same level all year round. Significant inter-and intraspecific polymorphism of the major dehydrins of 17 and 66–69 kD in the buds of downy birch, silver birch, and Karelian birch during dormancy was not found. The significant similarity in the composition of total proteins and dehydrins, as well as the uniform nature of their seasonal changes, mainly 17 kD dehydrin, indicates the phylogenetic proximity and similar mechanisms of adaptation of the main species of the genus Betula L. to the temperate continental climate of Karelia.



Reviews
Strigolactones as Regulators of Symbiotrophy of Plants and Microorganisms
Abstract
Strigolactones (SLs) are signal molecules of a butenolide nature from the apocarotenoids family that are synthesized by plant organisms. They are widely propagated in nature and control different aspects of plant development, which allows us to consider them as phytohormones. It is known that SLs production and release into the rhizosphere are enhanced under a deficit of basic elements of plant nutrition. In addition, these compounds carry out the signaling function in the course of establishing supraorganismal relationships upon parasitism and symbiosis. In this review, the role of SLs in the formation of arbuscular mycorrhiza (AM), which provides a symbiotic pathway of Pi uptake by plants and partly nitrogen-fixing legume nodules, is examined. The data on SLs impact on AM fungi (AMFs) development at presymbiotic and symbiotic stages of plant growth were generalized. The main peculiarities of SLs structure providing their efficiency as “branching factors” of AMF hyphae and basic mechanisms of the possible influence of SLs on AMFs, including stimulation of mitochondria biogenesis, were described. Analysis of these data and phenotypes of plant mutants with disturbances in SLs biosynthesis and its regulation and also SLs perception and transport leads to the conclusion that their role in AM development is predominantly revealed in induction of AMF hyphae branching at the presymbiotic plant growth stage and is associated with plant response to Pi deficit. Analysis of the role these components of common symbiotic signaling cascade play in the regulation of SLs biosynthesis in the course of AM development and nitrogen-fixing legumes nodules was carried out. An important role of SLs in nodule development likely caused by their endogenous influence on its organogenesis was demonstrated. A possibility of the presence of different pathways usable by a plant upon AM and nodule development for activation of common symbiotic transcriptional factors, NSP1 and NSP2, participating in the regulation of SLs biosynthesis is discussed. The data concerning structural specificity of SLs and the results of phylogenetic analysis of genes encoding different components of SLs biosynthesis and signaling pathways and also symbiotic signaling cascade in plants provide evidence for the possible transformation of SLs signaling function from the hormonal one manifested inside the plant into the communicative one providing the establishment of interorganismal relations.


