Preparation and Properties of Nanoparticles, tRNA–Bivalent Metal Cation (Me2+) Complexes, and Prospects of Their Practical Use


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Abstract

The patterns of formation of RNA nanoparticles (NPs) during thermal cycling of bacterial total tRNA in the presence of cations Ca2+, Mn2+, Ni2+, Zn2+, Co2+, and Cu2+ were studied. The optimal conditions for the production of NPs were found, and it was revealed that their size depends on the ratio of the concentrations of Me2+ and tRNA. The concentration of reagents for obtaining NPs of small size (from 5 to 100 nm) was selected. It was shown that tRNA-based nanoparticles can comprise short (20–50 nt) ribooligonucleotides, including aptamers and siRNAs. The stability of NPs during storage in buffer solutions of various composition was studied. It was found that the initial suspensions of NPs are quite stable, but they are rapidly destroyed in PBS buffer (pH 7.4). A simple and effective stabilizer (polyarginine) was found, the additives of which ensure the preservation of nanoparticles in PBS buffer for more than 5 h. Nanoparticles modified with the stabilizer are resistant to blood serum nucleases and can be used for transfection.

About the authors

V. N. Danilevich

Shemyakin–Ovchinnikov Institute of Bioorganic Chemistry

Author for correspondence.
Email: dan@ibch.ru
Russian Federation, Moscow, 117997

V. V. Sorokin

Vinogradsky Institute of Microbiology, Federal Research Center Fundamentals of Biotechnology

Email: dan@ibch.ru
Russian Federation, Moscow, 117312

Ya. P. Moiseev

Shemyakin–Ovchinnikov Institute of Bioorganic Chemistry

Email: dan@ibch.ru
Russian Federation, Moscow, 117997

S. V. Sizova

Shemyakin–Ovchinnikov Institute of Bioorganic Chemistry

Email: dan@ibch.ru
Russian Federation, Moscow, 117997

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