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Vol 482, No 1 (2018)

Biochemistry, Biophysics, and Molecular Biology

A New DNA Break Repair Pathway Involving PARP3 and Base Excision Repair Proteins

Belousova E.A., Kutuzov M.M., Ivankina P.A., Ishchenko A.A., Lavrik O.I.

Abstract

Poly(ADP-ribosyl)ation, which is catalyzed by PARP family proteins, is one of the main reactions in the cell response to genomic DNA damage. Massive impact of DNA-damaging agents (such as oxidative stress and ionizing radiation) causes numerous breaks in DNA. In this case, the development of a fast cell response, which allows the genomic DNA integrity to be retained, may be more important than the repair by more accurate but long-term restoration of the DNA structure. This is the first study to show the possibility of eliminating DNA breaks through their PARP3-dependent mono(ADP-ribosyl)ation followed by ligation and repair of the formed ribo-AP sites by the base excision repair (BER) enzyme complex. Taken together, the results of the studies on ADP-ribosylation of DNA and the data obtained in this study suggest that PARP3 may be a component of the DNA break repair system involving the BER enzyme complex.

Doklady Biochemistry and Biophysics. 2018;482(1):233-237
pages 233-237 views

Effect of Methyl Jasmonate on the Expression of Wcs Genes and the Activity of Antioxidant Enzymes at Wheat Cold Adaptation

Talanova V.V., Titov A.F., Repkina N.S., Ignatenko A.A.

Abstract

We studied the effect of phytohormone methyl jasmonate (MJ) on the expression of WCS (wheat cold specific) family genes and the activity of the key antioxidant enzymes in wheat seedling leaves at a low hardening temperature (4°C). Incubation at 4°C induced an increase in the cold tolerance of seedlings, which was accompanied by an increase in the levels of transcripts of WCS120 and WCS19 genes as well as an increase in the activity of superoxide dismutase (SOD) and peroxidase (PO). The pretreatment of seedlings with MJ significantly increased the mRNA content of WCS120 and WCS19 genes and, at the same time, caused an increase in the activity of SOD and PO, thus contributing to further increase in the cold tolerance of the plants (i.e., enhanced the hardening effect induced by low temperature).

Doklady Biochemistry and Biophysics. 2018;482(1):238-241
pages 238-241 views

New Haplotypes of the Mitochondrial Gene CytB in the Nesting Population of the Siberian Black Kite Milvus migrans lineatus Gray, 1831 in the Territory of the Republic of Tyva

Andreyenkova N.G., Andreyenkov O.V., Karyakin I.V., Zhimulev I.F.

Abstract

We analyzed a fragment of mitochondrial CytB locus obtained from young and adult black kites Milvus migrans lineatus from 19 nests in the Republic of Tyva, Russia. Three previously known (CytB-6, CytB-14, CytB-19) and three new haplotypes identified as CytB-6.1, CytB-6.2, and CytB-19.1 were detected. We described a set of substitutions specific to M. migrans lineatus but not to M. migrans migrans, the European subspecies of black kite.

Doklady Biochemistry and Biophysics. 2018;482(1):242-244
pages 242-244 views

The Application of Recombinant Phototoxins 4D5scFv-miniSOG and DARPin-miniSOG to Study the HER2 Receptor Internalization

Kuzichkina E.O., Shilova O.N., Deyev S.M., Petrov R.V.

Abstract

It was found that the fluorescent properties of the phototoxic domain of miniSOG allow to assess the ability of toxins to bind to human breast adenocarcinoma cells SK-BR-3 and study the dynamics of their internalization. We established that the main cause of the decrease of the fluorescence intensity of the recombinant proteins 4D5scFv-miniSOG and DARPin-miniSOG during their internalization in the complex with the HER2 receptor is their shielding and absorption of the fluorescence of miniSOG by the cells fluorophores.

Doklady Biochemistry and Biophysics. 2018;482(1):245-248
pages 245-248 views

Estrogen Receptors alpha and beta in Ovarian Cancer: Expression Level and Prognosis

Bogush T.A., Basharina A.A., Bogush E.A., Ryabinina O.M., Tjulandina A.S., Tjulandin S.A.

Abstract

The quantitative immunofluorescence assay of serous ovarian cancer tissue for the expression of estrogen receptors (ERα and ERβ) revealed a higher expression level of ERβ in comparison with ERα in all surgical tumor samples investigated. Significant differences in the expression level of the markers were detected “from tumor to tumor.” A high expression level of both ERα (≥ 25%) and ERβ (≥ 44%) in the tumor predicts a significantly longer progression-free survival time (p < 0.01) in the patients after the first line of platinum and taxane-based adjuvant chemotherapy.

Doklady Biochemistry and Biophysics. 2018;482(1):249-251
pages 249-251 views

Azelaic Acid-Induced Enzymes of Phenolic Defense in Pea Roots

Egorova A.M., Tarchevsky I.A.

Abstract

The treatment of pea roots with azelaic acid for 72 h led to a change in the content of 28 proteins: the content of 20 proteins decreased, and the content of 8 proteins (including the phenylpropanoid metabolism enzymes, which are involved in the synthesis of phytoalexins) increased.

Doklady Biochemistry and Biophysics. 2018;482(1):252-254
pages 252-254 views

The Role of GC-Rich Sequences from the Promoter Region of the Drosophila melanogaster yellow Gene in the Enhancer- Dependent Activation of Transcription

Kostyuchenko M.V., Golovnin A.K., Georgiev P.G., Melnikova L.S.

Abstract

It is shown that mutations in two GC-rich sequences (GC-boxes) from the promoter region of the yellow gene during enhancer-dependent transcription activation do not affect the basal level of the yellow gene transcription but destabilize the interaction between the enhancers and the promoter.

Doklady Biochemistry and Biophysics. 2018;482(1):255-260
pages 255-260 views

Polyprenyl Phosphates Induce a High Humoral and Cellular Response to Immunization with Recombinant Proteins of the Replicative Complex of the Hepatitis C Virus

Masalova O.V., Lesnova E.I., Onishchuk A.A., Ivanova A.M., Gerasimova E.V., Ivanov A.V., Narovlyansky A.N., Sanin A.V., Pronin A.V., Kushch A.A.

Abstract

The search for new adjuvants remains the critical task for the creation of hepatitis C vaccines due to the weak immunogenicity of biotechnological products. When immunizing mice with the recombinant proteins NS3 and NS5B of the hepatitis C virus (HCV), the adjuvant activity of three immunomodulators was compared. Phosprenyl® on the basis of polyprenyl phosphate (PPP), chemically synthesized analogue of the bacterial cell wall glucosaminyl muramyl dipeptide (GMDP), and IFN-α recombinant protein were tested. GMDP increased the activity of IgG1 antibodies 4–6 times but did not stimulate the production of IFN-γ; IFN-α has not shown any adjuvant properties. The introduction of recombinant HCV proteins together with PPP in low doses increased the activity of IgG2a isotype antibodies 4–7 times and increased IFN-γ secretion 3 times. Thus, it was first shown that PPP polarizes the immune response to Th1-type and is a promising adjuvant for the development of a vaccine against hepatitis C.

Doklady Biochemistry and Biophysics. 2018;482(1):261-263
pages 261-263 views

Selenium Nanoparticles—an Inducer of Tomato Resistance to the Root-Knot Nematode Meloidogyne incognita (Kofoid et White, 1919) Chitwood 1949

Udalova Z.V., Folmanis G.E., Khasanov F.K., Zinovieva S.V.

Abstract

We investigated the mechanisms of action of selenium nanoparticles obtained by laser ablation for their use as an abiogenic elicitor of tomato resistance to parasitic nematodes. Selenium nanoparticles induced systemic resistance of tomatoes to the root-knot nematode, stimulated plant growth and development, was involved in the PR-6 gene expression in the roots and leaves of plants subjected to invasion, and increased the activity of proteinase inhibitors (markers of systemic resistance of plants to infection). Exogenous treatment of plants with solutions of selenium nanoparticles reduced the invasion of plants by affecting the morphological and physiological parameters of the parasites in the roots.

Doklady Biochemistry and Biophysics. 2018;482(1):264-267
pages 264-267 views

Effect of Promising Antitumor Phenolic Antioxidant Anphen Sodium on the BCL-2 Family Proteins

Mil E.M., Erokhin V.N., Binyukov V.I.

Abstract

The proapoptotic effect of anphen (the effect on the level of the antiapoptotic protein Bcl-2) was investigated by immunoblotting. Incubation of Lewis carcinoma cell suspension with anphen at a concentration of 10–6 M for 0–3 h caused a 80% reduction in the level of the Bcl-2 protein and its homodimer. In vivo, when administered for 4 days to outbred mice, anphen (10–4 M) induced a decrease in the level of the Bcl-2 homodimer in the spleen cells by 20% and an increase in the content of the Bad protein (apoptosis activator) and the Bcl-XL protein. The antitumor effect of anphen may be due to blocking the hydrophobic pocket of the Bcl-2 protein.

Doklady Biochemistry and Biophysics. 2018;482(1):268-270
pages 268-270 views

Synthesis of Proteins Encoded by the Early Genes E2, E6, and E7 of Papillomavirus of Type 16 in the Plant Expression System

Salyaev R.K., Rekoslavskaya N.I., Stolbikov A.S.

Abstract

An expression system for the synthesis of early antigenic proteins HPV16 E2, HPV16 E6, and HPV16 E7 of high-risk papillomavirus based on transgenic tomato fruits was developed. It is planned to use the early antigenic proteins synthesized to create a therapeutic vaccine against cervical cancer.

Doklady Biochemistry and Biophysics. 2018;482(1):271-274
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Features of Interspecific Contacts and Hybridization of Ground Squirrels (Marmotinae, Sciuridae, Rodentia) in Mongolia

Kapustina S.Y., Lyapunova E.A., Adiya Y., Brandler O.V.

Abstract

Using molecular genetic methods, we investigated the secondary contact zones of two pairs of species of ground squirrels of Mongolia. In common colonies of marmots M. sibirica and M. baibacina, we revealed a high frequency of occurrence of hybrid individuals that were viable and fertile. A hybridization between S. alaschanicus and S. pallidicauda was sporadic in nature. The hypothesis about an extensive hybrid zone in these species of ground squirrels was not confirmed. An occupation of suboptimal biotopes by individuals of different species was the main factor contributing to hybridization in both case. The complex social behavior in marmots affected on the localization and diffusion of the hybridization process.

Doklady Biochemistry and Biophysics. 2018;482(1):275-278
pages 275-278 views

Diversity of the CO1 Gene of Mitochondrial DNA in Representatives of Genus Antimora (Moridae, Gadiformes) in the World Oceans

Orlova S.Y., Volkov A.A., Gordeev I.I., Baitaliuk A.A., Orlov A.M.

Abstract

The frequency of occurrence of the COI gene of mitochondrial DNA in the Pacific flatnose Antimora microlepis and blue antimora Antimora rostrata (Moridae, Gadiformes) was analyzed in samples collected in different areas of the World Ocean. The revealed maximum haplotype diversity of COI in the blue antimora in the North Atlantics may indicate that this species emerged in this region, from which it widely distributed in the World Ocean. The Pacific flatnose Antimora microlepis originated from Antimora rostrata. Antimora might penetrate into the North Pacific by several routes: through the Panama Strait, along the coast of Antarctica, or through the Indian Ocean along the coast of Australia.

Doklady Biochemistry and Biophysics. 2018;482(1):279-283
pages 279-283 views

Membrane-Bound Bacteriophytochrome-Like Complex of Phototrophic Purple Non-Sulfur Bacterium Rhodopseudomonas palustris

Serdyuk O.P., Smolygina L.D., Khristin M.S.

Abstract

A pigment-protein complex of yellow color with absorption maxima at 682 and 776 nm, characteristic for bacteriophytochromes, was isolated from the photosynthetic membranes of the purple bacterium Rhodopseudomonas palustris. Zinc-induced fluorescence of the complex indicated the presence of the biliverdin chromophore covalently bound to the protein. The parameters of low-temperature fluorescence (λ excitation at 680 nm, λ emission at 695 nm) indicated the ability of the complex to undergo photoconversion. These data, as well as the kinetics of accumulation of the red (Pr)-form on far red light, allowed the complex to be classified as a bacteriophytochrome-like complex with its localization in the photosynthetic membranes of Rps. palustris.

Doklady Biochemistry and Biophysics. 2018;482(1):284-287
pages 284-287 views

Death Mechanism of Breast Adenocarcinoma Cells Caused by BRET-Induced Cytotoxicity of miniSOG Depends on the Intracellular Localization of the NanoLuc–miniSOG Fusion Protein

Shramova E.I., Proshkina G.M., Deyev S.M., Petrov R.V.

Abstract

Photodynamic therapy (PDT) is widely used in clinical practice to influence neoplasms in the presence of a photosensitizer, oxygen, and light source. The main problem of PDT of deep tumors is the problem of delivering excitation light (without lost of its intensity) inside the body. An alternative to the external light sources can be the internal light sources based on luciferase–substrate bioluminescent systems. In our work, we used the NanoLuc–furimazine system as an internal light source. This system can be successfully used to excite the protein photosensitizer miniSOG and to induce the phototoxicity of this flavoprotein in cancer cells during bioluminescent resonance energy transfer (BRET). It was shown that the mechanism of cell death caused by BRET-induced phototoxicity of mimiSOG in the presence of furimazine depends on the intracellular localization of the NanoLuc–miniSOG fusion protein: BRET-mediated activation of miniSOG in mitochondrial localization causes apoptosis, while the membrane localization of PS causes necrosis of cancer cells.

Doklady Biochemistry and Biophysics. 2018;482(1):288-291
pages 288-291 views