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Vol 484, No 1 (2019)

Biochemistry, Biophysics, and Molecular Biology

Anticholinesterase and Antioxidant Activity of New Binary Conjugates of γ-Carbolines

Makhaeva G.F., Shevtsova E.F., Boltneva N.P., Kovaleva N.V., Rudakova E.V., Dubova L.G., Shevtsov P.N., Bachurin S.O.

Abstract

The synthesized new binary conjugates of tetrahydro-γ-carbolines, which contained ditriazole spacers of different length, exhibited considerable anticholinesterase and antioxidant activity as well as the potential ability to block the acetylcholinesterase-induced aggregation of β-amyloid in contrast to the original prototype Dimebon. This makes the compounds promising candidates for further investigation as drugs for the treatment of Alzheimer’s disease. Special attention should be given to the conjugate containing the hexamethylene intertriazole spacer, which can be considered as a leader in this series of compounds.

Doklady Biochemistry and Biophysics. 2019;484(1):1-5
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Diversity of Harpin-Like Defense Peptides from Barnyard Grass (Echinochloa crusgalli L.) Seeds

Smirnov A.N., Zavriev S.K., Ryazantsev D.Y., Rogozhin E.A., Tsvetkov V.O., Yarullina L.G.

Abstract

The results of the study of the structure and function of harpin-like peptides (alpha-harpinins) of the EcAMP group from the barnyard grass (E. crusgalli) seeds and the possibility of their involvement in the innate immunity to biotic stresses are presented.

Doklady Biochemistry and Biophysics. 2019;484(1):6-8
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Recombinant Production and Structure–Function Study of the Ts1 Toxin from the Brazilian Scorpion Tityus serrulatus

Shenkarev Z.O., Shulepko M.A., Peigneur S., Myshkin M.Y., Berkut A.A., Vassilevski A.A., Tytgat J., Lyukmanova E.N., Kirpichnikov M.P.

Abstract

An effective bacterial system for the production of β-toxin Ts1, the main component of the Brazilian scorpion Tityus serrulatus venom, was developed. Recombinant toxin and its 15N-labeled analogue were obtained via direct expression of synthetic gene in Escherichia coli with subsequent folding from the inclusion bodies. According to NMR spectroscopy data, the recombinant toxin is structured in an aqueous solution and contains a significant fraction of β-structure. The formation of a stable disulfide-bond isomer of Ts1, having a disordered structure, has also been observed during folding. Recombinant Ts1 blocks Na+ current through NaV1.5 channels without affecting the processes of activation and inactivation. At the same time, the effect upon NaV1.4 channels is associated with a shift of the activation curve towards more negative membrane potentials.

Doklady Biochemistry and Biophysics. 2019;484(1):9-12
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Molecular Mechanisms of Control of Differentiation of Regulatory T-Lymphocytes by Exogenous Melatonin

Glebezdina N.S., Olina A.A., Nekrasova I.V., Kuklina E.M.

Abstract

We investigated the role of epiphyseal hormone melatonin in the differentiation of naive CD4+ T cells into regulatory T cells (Treg). The hormone at physiological and pharmacological concentrations inhibited Treg differentiation, decreasing both the proportion of CD4+FOXP3+ cells in the culture and the level of TGF-β, the key cytokine for this T cell subpopulation. The inhibitory effect of exogenous melatonin was due to its interaction with the membrane receptors MT1 and MT2. At the same time, the signals realized through RORα—the nuclear receptor for melatonin—stimulated Treg formation; however, they were considerably weaker than the signals from the membrane receptors and were overlapped by the latter. Since the Treg subpopulation plays an important role in physiological and pathological processes in the body, the revealed effects of melatonin should be taken into account in its therapeutic use.

Doklady Biochemistry and Biophysics. 2019;484(1):13-16
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A Novel Dipeptide Ligand of TSPO

Deeva O.A., Pantileev A.S., Rybina I.V., Yarkova M.A., Gudasheva T.A., Seredenin S.B.

Abstract

On the basis of the first dipeptide ligand of TSPO, N-carbobenzoxy-L-tryptophanyl-L-isoleucine amide (GD-23), which was obtained by us earlier, we synthesized a new dipeptide, N-phenylpropionyl-L-tryptophanyl-L-leucine amide (GD-102). GD-102 exhibited anxiolytic activity in the open field test in BALB/c mice and in the elevated plus maze test in ICR mice. The minimum effective dose of GD-102 was one order of magnitude lower than that of GD-23. Compound PK11195, a selective antagonist of TSPO, completely blocked the anxiolytic activity of GD-102, which testified to the involvement of TSPO in the realization of the anxiolytic effect of GD-102. The results were confirmed by molecular docking data.

Doklady Biochemistry and Biophysics. 2019;484(1):17-20
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Intramolecular Mobility Affects the Energy Migration from Quantum Dots to Reaction Centers of Photosynthesizing Bacterium Rb. sphaeroides

Krasilnikov P.M., Lukashev E.P., Knox P.P., Seyfullina N.K., Rubin A.B.

Abstract

The temperature dependence of the efficiency of energy migration from the CdSe/CdS/ZnS quantum dots (QDs) with a fluorescence maximum at 580 nm to the reaction centers (RCs) of the bacteria Rb. sphaeroides is practically constant over the temperature range from 100 to ~230–240 K but then decreases 2.5–3 times as temperature further increases to 310 K. The analysis on this dependence on the basis of Förster’s theory showed that the major changes in the energy transfer efficiency are associated with the temperature change in the quantum yield of QD fluorescence, which is due to the activation of intramolecular mobility in the RC structure.

Doklady Biochemistry and Biophysics. 2019;484(1):21-24
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Dynamics of in Vivo Metabolites Concentrations in Posttraumatic Period of Human Brain. 1H MRS Study

Semenova N.A., Menshchikov P.E., Manzhurtsev A.V., Ublinskiy M.V., Akhadov T.A., Varfolomeev S.D.

Abstract

For the first time the intracellular concentrations of N-acetylaspartate (NAA), aspartate (Asp), and glutamate (Glu) were measured in human brain in vivo, and the effect of severe traumatic brain injury on NAA synthesis in acute and remote posttraumatic phases was revealed. In non-damaged (MRI-negative) lobes the next day after injury, Asp and Glu decreased by 45% and 35%, respectively, while NAA decreased only by 16%. A negative correlation between NAA and Asp/Glu ratio was found. The Glu level returned to the norm long after injury, Asp remained below the norm by 60%, NAA decreased by 65% relative to the norm, and Asp/Glu decreased significantly. The results obtained educe the leading role of neuronal aspartate–malate shuttle in NAA synthesis alterations.

Doklady Biochemistry and Biophysics. 2019;484(1):25-28
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Identification and Expression Analysis of Chitinase Genes in Pitchers of Nepenthes sp. during Development

Filyushin M.A., Kochieva E.Z., Shchennikova A.V., Beletsky A.V., Mardanov A.V., Ravin N.V., Skryabin K.G.

Abstract

Fifteen chitinases of classes I–V were identified in the transcriptomes of pitchers and adult leaves of the carnivorous plant Nepenthes sp. Ten of these chitinases were identified for the first time, including the chitinases of classes II and V. The expression levels of all found chitinase genes in leaves and at three stages of pitcher development were determined. The maximum level of transcriptional activity in an open pitcher was observed for the genes encoding chitinase NChi4 (class II) and its isoforms. The expression levels of these genes significantly increased as the pitcher developed. In addition, for the first time, transcription of the genes encoding chitinases of all five classes was detected in the leaves of this plant.

Doklady Biochemistry and Biophysics. 2019;484(1):29-32
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A Novel PRE-Element from Drosophila virilis Genome as a Useful Model Silencer

Chetverina D.A., Mikhailova A.V., Georgiev P.G., Erokhin M.M.

Abstract

We tested the activity of the PRE element from the Drosophila virilis genome, which is the homologue of the known Drosophila melanogasterbxdPRE element from the regulatory region of the Ubx gene. It is easy to select unique primers to this element that do not occur in the Drosophila melanogaster genome. We showed that the studied PRE element causes a strong repression of the white marker gene upon insertion into the Drosophila melanogaster genome and interacts with the PcG proteins of the PRC1 and PhoRC complexes.

Doklady Biochemistry and Biophysics. 2019;484(1):33-36
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Hypochlorite-Induced Oxidative Modification of Fibrinogen

Yurina L.V., Vasilyeva A.D., Bugrova A.E., Indeykina M.I., Kononikhin A.S., Nikolaev E.N., Rosenfeld M.A.

Abstract

Oxidation of fibrinogen with hypochlorite inhibited the fibrin network self-assembly even at the lowest concentration of the oxidant. The analysis of the results of protein electrophoresis at this hypochlorite concentration showed the absence of fragmentation of the protein and covalent cross-linking of its chains. The study of the areas responsible for the conversion of fibrinogen into fibrin by mass spectrometry showed that they are not subject to oxidative damage. However, we identified oxidized amino acid residues, which could affect the protofibril aggregation.

Doklady Biochemistry and Biophysics. 2019;484(1):37-41
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Biotechnological Method of Preparation and Characterization of Recombinant Antimicrobial Peptide Avicin A from Enterococcus avium

Balandin S.V., Finkina E.I., Nurmukhamedova E.K., Tagaev A.A., Umnyakova E.S., Kokryakov V.N., Shvets V.I., Ovchinnikova T.V.

Abstract

Avicin A is a bacteriocin from the gram-positive bacterium Enterococcus avium. It exhibits a high microbicidal activity against bacteria of the genus Listeria, a causative agent of the severe human infection listeriosis. We developed a biotechnological method for obtaining avicin A and characterized its structure and biological activity. We also proposed a possible mechanism of the antimicrobial action of avicin A.

Doklady Biochemistry and Biophysics. 2019;484(1):42-44
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Effect of Transcription on the white Gene Enhancer Integrated into the Intron

Erokhin M.M., Mikhailova A.V., Georgiev P.G., Chetverina D.A.

Abstract

In this paper, we demonstrate that passing-through transcription suppresses the activity of the white gene enhancer integrated into the intron. At the same time, the SV40 transcription terminators flanking the transgene can completely remove the inhibitory effect of transcription.

Doklady Biochemistry and Biophysics. 2019;484(1):45-47
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Experience of Antiseptic Application for Processing of Rat Lung Biological Matrices

Dzhimak S.S., Kachanova O.A., Chvalun S.N., Kuevda E.V., Gubareva E.A., Basov A.A., Krasheninnikov S.V., Grigoriev T.E., Gumenyuk I.S.

Abstract

To select the optimum method for disinfecting scaffolds before recellularization, the effects of octenisept and chlorhexidine at different concentrations on lung biological matrices before and after decellularization were studied by using morphological methods (studies of biomechanical strength of extracellular matrix fibers) and by analyzing chemiluminescence in rats. Chlorhexidine diluted 1 : 10 had the least damage on the matrix properties and to the greatest extent contributed to disinfection of scaffolds for their further storage and experimental studies.

Doklady Biochemistry and Biophysics. 2019;484(1):48-51
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The New Plant Expression System for the Development of Vaccines against Papillomaviruses

Salyaev R.K., Rekoslavskaya N.I., Stolbikov A.S.

Abstract

To enhance the synthesis of antigenic envelope proteins L1 of high-grade papillomavirus types HPV16, HPV18, HPV31, and HPV45, the sequence of the gene encoding the cucumber mosaic virus replicase (RdRP CMV) was inserted into the genetic construct. This made it possible to increase the production of these antigenic proteins to 25–27 μg/mg total soluble protein.

Doklady Biochemistry and Biophysics. 2019;484(1):52-54
pages 52-54 views

Gene dunce Localization in the Polytene Chromosome of Drosophila melanogaster Long Span Batch of Adjacent Chromosomal Structures

Khoroshko V.A., Pokholkova G.V., Zykova T.Y., Osadchiy I.S., Zhimulev I.F.

Abstract

The molecular and chromosomal localization of the dunce gene was studied. This gene (167.3 kb) consists almost entirely of introns, in which a cluster of seven short tissue-specific genes is located. On the basis of the results of FISH analysis of the gene fragments, we established that the dunce gene is located within nine chromosomal structures (four bands and five interbands), which contradicts the common idea that genes are located in only one structure (band or interband) or at the boundary of these structures. Our results are quite unexpected and original and greatly expand the current understanding of the genetic organization of interphase chromosomes.

Doklady Biochemistry and Biophysics. 2019;484(1):55-58
pages 55-58 views

Personalized Approach to Assessing mRNA Expression of Histidine-Rich Glycoprotein and Immunohistochemical Markers in Diseases of the Breast

Autenshlyus A.I., Golovanova A.V., Studenikina A.A., Brusentsov I.I., Proskura A.V., Zhurakovskiy I.P., Arkhipov S.A., Sidorov S.V., Vavilin V.A., Lyakhovich V.V.

Abstract

Biopsy material of patients with malignant and benign breast diseases was examined. HRG mRNA expression was detected in 70% of cases in biopsy material obtained from patients with nonspecific invasive carcinoma and in 66.7% of cases in biopsy material of patients with benign breast diseases. Immunohistochemical analysis revealed expression of collagen II, the beta-1 integrin, and E-cadherin—markers of epithelial–mesenchymal transition. The use of RT-qPCR combined with immunohistochemical study made it possible to identify atypical cells, which can be regarded as precancerous changes, in individual patients.

Doklady Biochemistry and Biophysics. 2019;484(1):59-62
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Sigma-1 Receptor Antagonists Haloperidol and Chlorpromazine Modulate the Effect of Glutoxim on Na+ Transport in Frog Skin

Krutetskaya Z.I., Melnitskaya A.V., Antonov V.G., Nozdrachev A.D.

Abstract

Using voltage-clamp technique, the involvement of sigma-1 receptors in the regulation of Na+ transport in frog skin by the immunomodulatory drug glutoxim was investigated. We have shown for the first time that preincubation of the frog skin with the sigma-1 receptor antagonists haloperidol and chlorpromazine attenuates the stimulatory effect of glutoxim on the Na+ transport. The results suggest the possible involvement of the sigma-1 receptors in the regulation of Na+ transport in frog skin epithelium by glutoxim.

Doklady Biochemistry and Biophysics. 2019;484(1):63-65
pages 63-65 views

Oncogene c-MYC Controls the Expression of PHF10 Subunit of PBAF Chromatin Remodeling Complex in SW620 Cell Line

Tatarskiy E.V., Georgiev G.P., Soshnikova N.V.

Abstract

The PBAF(SWI/SNF) multiprotein complex, which changes the chromatin structure, is widely involved in the regulation of eukaryotic gene expression. A specific component of this complex is the PHF10 protein, which is involved in recruiting this complex to chromatin. We showed that the PHF10 expression in cells of different lines is activated by the c-MYC oncogene. Since PHF10 stimulates cell proliferation, its c-MYC-dependent activation in cancer cells should lead to an increase in their proliferation rate.

Doklady Biochemistry and Biophysics. 2019;484(1):66-68
pages 66-68 views

Development of an Immunosorbent for Solid-Phase NMR-Based Assay

Khramtsov P.V., Kropaneva M.D., Bochkova M.S., Timganova V.P., Zamorina S.A., Rayev M.B.

Abstract

The conditions for constructing an immunosorbent reagent for solid-phase NMR analysis were optimized. For this purpose, we increased the area of ​​the sensitized portion of the membrane to fit the relaxometer coil size and added the agent sorption buffer. This provided the penetration of the anti-ligand molecules into the membrane thickness and their uniform distribution.

Doklady Biochemistry and Biophysics. 2019;484(1):69-72
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Regulation of Recombinase Rag-1 Expression by Female Sex Steroids in Treg and Th17 Lymphocytes: Role of Oncostatin M

Shirshev S.V., Nekrasova I.V., Gorbunova O.L., Orlova E.G.

Abstract

The effect of estradiol (E2), progesterone (P4), and oncostatin M (OSM) on the differentiation of CD4+ T cells to T regulatory (Treg) lymphocytes and T helpers 17 (Th17) was investigated. The possibility of revision of the T cell receptor in these subpopulations by evaluating the expression of RAG-1 recombinase was also studied. E2 at concentrations characteristic of pregnancy trimester I, but no P4 or OSM, increased the Treg level. Combination of sex steroids with OSM increased the percent of CD4+FOXP3+ cells and enhanced RAG-1 expression in these cells, thus promoting the development of immune tolerance during pregnancy. In the study of Th17, such effect of the hormones and OSM was not detected.

Doklady Biochemistry and Biophysics. 2019;484(1):73-77
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Conservation of Steroidogenic Effect of the Low-Molecular-Weight Agonist of Luteinizing Hormone Receptor in the Course of Its Long-Term Administration to Male Rats

Bakhtyukov A.A., Derkach K.V., Dar’in D.V., Shpakov A.O.

Abstract

Abstract—It was shown that the thienopyrimidine derivative TP03, a low-molecular-weight agonist of the luteinizing hormone receptor (LHR), during the treatment of male rats for 7 days steadily increased the production of testosterone (T), whose elevated level was retained for 7 days, and increased the expression of the gene for LHR, which indicates the maintenance of the sensitivity of Leydig cells to gonadotropins. At the same time, the steroidogenic effect of human chorionic gonadotropin (hCG), which significantly increased the T level on the first day of administration, was further weakened, which was accompanied by a decrease in the expression of the gene for LHR in the testes, indicating the development of resistance of Leydig cells to hCG. Along with this, in the case of hCG administration, a compensatory increase in the expression of genes of the steroidogenic enzymes, such as cytochrome P450scc and dehydrogenase 3β-HSD, was shown in the testes, while in the case of TP03 administration this effect was absent.

Doklady Biochemistry and Biophysics. 2019;484(1):78-81
pages 78-81 views

Estimation of Decellularization and Recellularization Quality of Tissue-Engineered Constructions by the Chemiluminescence Method

Gubareva E.A., Kuevda E.V., Kade A.H., Bykov I.M., Pavlyuchenko I.I., Gaivoronskaya T.V., Sidorenko A.N., Cymbalov O.V., Ovsyannikov V.G., Myasnikova V.V., Shashkov D.I., Dzhimak S.S.

Abstract

It was found that the chemiluminescence intensity in native and recellularized tissues of rat muscular organs as well as in their decellularized scaffolds can serve as an express criterion that, along with ultrastructural analysis, makes it possible to perform quantitative assessment of the viability of cellular structures in biological samples of the diaphragm.

Doklady Biochemistry and Biophysics. 2019;484(1):82-84
pages 82-84 views

Magnetic Fields and Magnetic Isotope 25Mg Effects on Biofilms Formation by Bacteria E. coli

Letuta U.G., Tikhonova T.A.

Abstract

The biofilm formation by bacteria E. coli is a magnetosensitive process. The combined effects of a magnetic magnesium isotope 25Mg and a static magnetic field in the range of 20–35 mT stimulate biofilm formation by E. coli compared to nonmagnetic magnesium isotopes 24.26Mg. Magnetic field effects in the range of 2–10 mT, recorded for all bacteria regardless of the magnesium-isotope enrichment of the nutrient medium, indicate the sensitivity of intracellular processes to weak magnetic fields.

Doklady Biochemistry and Biophysics. 2019;484(1):85-87
pages 85-87 views

Functional Analysis of Coilin in Virus Resistance and Stress Tolerance of Potato Solanum tuberosum using CRISPR-Cas9 Editing

Makhotenko A.V., Khromov A.V., Snigir E.A., Makarova S.S., Makarov V.V., Suprunova T.P., Kalinina N.O., Taliansky M.E.

Abstract

The role of the nuclear protein coilin in the mechanisms of resistance of potato Solanum tuberosum cultivar Chicago to biotic and abiotic stresses was studied using the CRISPR–Cas9 technology. For the coilin gene editing, a complex consisting of the Cas9 endonuclease and a short guide RNA was immobilized on gold or chitosan microparticles and delivered into apical meristem cells by bioballistics or vacuum infiltration methods, respectively. Editing at least one allele of the coilin gene considerably increased the resistance of the edited lines to infection with the potato virus Y and their tolerance to salt and osmotic stress.

Doklady Biochemistry and Biophysics. 2019;484(1):88-91
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Innate Immune Protein Tag7 Stimulates the Appearance of Cytotoxic NK Cells after Incubation with Lymphocytes

Sharapova T.N., Romanova E.A., Sashchenko L.P., Gnuchev N.V., Yashin D.V.

Abstract

Tag7 (PGRP-S) is an innate immune protein that is involved in the antibacterial and antitumor defense and stimulates the maturation of cytotoxic lymphocyte subpopulations. It was found that the incubation of lymphocytes with Tag7 for 3 days promotes the appearance of cytotoxic NK cells that are active against a number of tumor cell lines.

Doklady Biochemistry and Biophysics. 2019;484(1):92-94
pages 92-94 views